Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFGMKVNEQITLKILEAHDTEALFNLVNRSRNSLREWLPWVDATEQPSDTRAFIKRGLLQFADGNGFQCGIWYEGTLVGVIGLHEINHMHRKTSLGYYLDKQFEGHGIMTQAVEALIKYCFEELDLNRIEISAAVNNEKSRAIPERLGFTREGMLRDNELLNGIYSSSYIYSLLKSEYDQK
1Z9U Chain:A ((5-173))
---IPVSTTLELRAADESHVPALHQLVLKNKAWLQQSLD--QY-TSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAIEPINKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYHDVNMYA---------
General information:
TITO was launched using:
RESULT:
Template:
1Z9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83757 for 1213 contacts (-69.0/contact) +
2D Compatibility (PS) -17777 + (NN) -1781 + (LL) 1260
1D Compatibility (HY) -12800 + (ID) 2300
Total energy: -117155.0 ( -96.58 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_1Z9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z9U-query.scw
PDB file :
Tito_Scwrl_1Z9U.pdb
: