Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDQHNLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRPELSNASDKVASASSLSQDEVKELNRLLGKVIHAFDETKEK
3HSR Chain:A ((6-128))
------LSKQLCFLFYVSSKEIIKKYTN-YLKEYDLTYTGYIVLMAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTR-------LQISLTEQGKAIKSPLAEISVKVFNEFNISEREASDI-----------------
General information:
TITO was launched using:
RESULT:
Template:
3HSR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72077 for 740 contacts (-97.4/contact) +
2D Compatibility (PS) -11662 + (NN) 1436 + (LL) 2060
1D Compatibility (HY) -12000 + (ID) 2000
Total energy: -94243.0 ( -127.36 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_3HSR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HSR-query.scw
PDB file :
Tito_Scwrl_3HSR.pdb
: