Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEALKDSILGALEMVIDPELGIDIVNLGLVYKVNVDDEGVCTVDMTLTSMGCPMGPQIIDQVKTVLAEIPEIQDTEVNIVWSPPWTKDMMSRYAKIALGVS
3CQ3 Chain:A ((15-101))
------------LEAVYDPELGLDVVNLGLIYDLVVEPP-RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTFEPPWTLARLSEKARRLLG--
General information:
TITO was launched using:
RESULT:
Template:
3CQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66745 for 577 contacts (-115.7/contact) +
2D Compatibility (PS) -9424 + (NN) -3927 + (LL) 1040
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -88506.0 ( -153.39 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3CQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CQ3-query.scw
PDB file :
Tito_Scwrl_3CQ3.pdb
: