Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKVESIIIGGGPCGLSAAIEQKR--KGIDTLIIEKGNVVESIYNYPTHQTFFSSSDKLSIGDVPFIVEESKPRRNQALVYYREVVKHHQLKVNAFEEVLTVKKMNNKFTITTTKDVYECRF--LTIATGYYGQHNTLEVEGADL---------PKVFHYFKEAHPYFDQDVVIIGGKNSAIDAALELEKAGANVTVLYR----GGDYSPSIKPWILPNFTALVNHEKIDMEFNANVTQITEDTVTYEVNGESKTIHNDYVFAMIGYHPDYEFLKSVGIQINTNEFGTAPMYNKETYETNIENCYIAGVIAAGNDANTIFIENGKFHGGIIAQNMLAKKQTPLES |
| 3CGD Chain:A ((40-320)) | ------VIIGGDAAGMSAAMQIVRNDENANVVTLEKG----EIYSYAQCGLPYVISGAIASTE-KLIARNVKTFRDKYGIDAK--VRHEVTKVDTEKKIVYAEH-------TKTKDVFEFSYDRLLIATGV--RPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKE----ADKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVKPNTDFLE--GTNIRTNHKGAIEV--NAYMQTNVQDVYAAGDCA---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139166 for 2041 contacts (-68.2/contact) +
2D Compatibility (PS) -27846 + (NN) -2949 + (LL) 4408
1D Compatibility (HY) -13200 + (ID) 3850
Total energy: -182603.0 ( -89.47 by residue)
QMean score : 0.307
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