Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK-SNEKTQFEVTYTRNQDIL-KNRPGIHYAPPILEKNKDGQRLI-----VTYEVDWKNKTVKVVDKYSDDNKPYKEG |
| 1T5R Chain:A ((5-280)) | ----------------------------------------------------------------ENIG--AEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDHIKAMRWPFQYNIGLKT-NDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNFNS--------SFNYSKTISYNQQNYISEVEHQNSK-SVQWGIKANSFIT---KMSGHDPNLFVGYKPYS--QNPRDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATRRT----NSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKV-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1787 for 1982 contacts (0.9/contact) +
2D Compatibility (PS) -26842 + (NN) -5453 + (LL) 4680
1D Compatibility (HY) -17600 + (ID) 4650
Total energy: -48078.0 ( -24.26 by residue)
QMean score : 0.326
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