Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPRVLVGRDTRVSGEMLESALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISASHNPVADNGIKFFGSDGFKLSDEQENEIEALLDQ-ENPELPRPVGNDIVHYSDYFEGAQKYLSYLKSTVDVNFEGLKIVLDGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKCGSTHPEKLAE---KVVETESDFGLAFDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQELNNDMIVSTVMSNLGFYKALEQEGIKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVMMD-YNTTGDGLLTGIQLASVIKMTGKSLSELAGQMKKYPQSL----INVRVTD--KYRVEENV--DVK------EVMTKVEVEMNGEGRILVRPSGTEPLVRVMVEAATDEDAERFAQQIADVVQDKMGLDK |
| 1K2Y Chain:X ((19-444)) | ---------IRGVVGDTLTAETAYWIGRAIG---SESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGAHNPPDYNGFKIVVA-GETLANEQ---IQALRERIEKNDLASGVGS--VEQVDILP---RYFKQIRDDIAMA-KPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGAD--IIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHV---FSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEGNITTLDGVRVDYP-KGWGLVRASNTTPVLVLRFEADTEEELERI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102768 for 3632 contacts (-28.3/contact) +
2D Compatibility (PS) -43753 + (NN) -20903 + (LL) 2220
1D Compatibility (HY) -28800 + (ID) 6200
Total energy: -200204.0 ( -55.12 by residue)
QMean score : 0.522
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