Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAAINKKYFGYLSLINLPYLAWVLFLLYRAKNPFTEIVLEKTLGHLLGILSLLFLQSSLLNQGEIGNSARLFLHPFIGDFGLYVLIMLMVVISYLILFKLPPKSVFYPYMNKTQSLLKEIYKQCLQAFSPNFSLKKEGFENTPSDSQKKETNNDKEKENLKENPIDENHNTPNEESFLAIPTPYNTTLNNSEPQEGLVQISPHPPTHYTIYPKRNRFDDLTNPTLKEPKQETKEREPTLKKETPTTLKPIMPISASNTENHDKTENHKTPNHPIKEDDLQESPQENPQKENIEENIEEKETQNAPSFSPLTLTSAKKPVMVKELSENKEILDGLDYGEVQKPKDYELPTTQLLNAVCLKETSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPSVKVSRILGLSDDLAMTLCAESIRIQAPIKGKDVVGIEIPNSQSQIIYLREILESELFQKSSSPLTLALGKDIVGNPFITDLKKLPHLLIAGTTGSGKSVGVNAMILSLLYKNPPDQLKLVMIDPKMVEFSIYADIPHLLTPIITDPKKAIGALQSVAKEMERRYSLMSEYKVKTIDSYNEQAQSNGVEAFPYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVVTGLIKTNLPSRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGTNGLVRLHAPFATEDEIKKIVDFIKAQKEVEYDKDFLLEESRMPLDTPNYQGDDILERAKAVILEKKITSTSFLQRQLKIGYNQAATITDELEAQGFLSPRNAKGNREILQNF |
2VE9 Chain:A ((8-66)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDPLYDEAVRFVTESRRASISAVQRKLKIGYNRAARMIEAMEMAGVVTPMNTNGSREVIAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19819 for 388 contacts (-51.1/contact) +
2D Compatibility (PS) -6578 + (NN) -4092 + (LL) 49724
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: 13735.0 ( 35.40 by residue)
QMean score : 0.680
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