Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGCSFIFKKVRVYSKML---VALGLSSVLIGCAMNPSAETKKPNDAKNQQPVQTHERMTTSSEHVTPLDFNYPVHIVQAPQNHHVVGILMPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNVQDKKKIFSVLDLKGWVGILEDLKMNLKDPNSPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAITYTYTSTNNASGGFNSSKSVIHENLDKNREDAIHKILNRMYAVVMKKAVTELTKENIAKYRDAIDRMKGFKSSMPQKK |
| 4NPM Chain:A ((159-224)) | FGCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYAADDITHCIRPQDIKERRAVIILRKTRADAPR---LD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6290 for 249 contacts (-25.3/contact) +
2D Compatibility (PS) -6788 + (NN) -191 + (LL) 14580
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -3289.0 ( -13.21 by residue)
QMean score : 0.183
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