Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADTINTTETTHETKKPNAFVNFFKNNLTDKRYDSLGLIGAGVLCCVLSGAMGIVGIIFVAIGIFLSFSNINLVKLVEKLSKKQPKAATTVNNETQKSQAASVTNEPTEAKETKD
1Q90 Chain:L ((14-31))
--------------------------------------------------------ALVFTLGIYLGLLKVVKLI----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7283 for 72 contacts (-101.2/contact) +
2D Compatibility (PS) -1656 + (NN) 966 + (LL) 5716
1D Compatibility (HY) -3200 + (ID) 150
Total energy: -5607.0 ( -77.88 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_1Q90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q90-query.scw
PDB file :
Tito_Scwrl_1Q90.pdb
: