Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGKKNEEVLIDENLVGGVIALDRLAKLNKANRTFKRAFYLSMVLNVAAVTSIVMMMPLKKTDIFVYGIDRYTGEFKIVKRSDARQIVNSEAVVDSATSKFVSLLFGYSKNSL----RDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQREKVKNSPLTRLTFFITIKITPDTMENYEYITKKQVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKIKEVESKNKALNK |
| 1Y4U Chain:A ((273-401)) | ---------------------------------------------------------------------------------------------------EYTSLLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTR------------NLRN--ALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13025 for 882 contacts (-14.8/contact) +
2D Compatibility (PS) -12712 + (NN) 1255 + (LL) 9680
1D Compatibility (HY) -8000 + (ID) 1500
Total energy: -24302.0 ( -27.55 by residue)
QMean score : 0.100
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