Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFKFILCLSLGIFAWAKEVIPTPSTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQIGFSTKEFDFSKNKAMKWSSYLGFFNKSPRVTRFGISLAQDMYTPSLANRKLVHLHDNHPYGGYLRVNLNVYNRHQTFMELFTISLGTTGQDSLAAQTQRLIHKWGHDPQFYGWNTQLKNEFIFELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNKVNTAFDGGMPYSDKFSIYFFAGAFGRFQPLNIFIQGNSPETR------------GIA-NLEYFVYASEIGAAMMWRSLRVAFTITDISKTFQSQPKHHQIGTLELNFAF |
2Y4S Chain:A ((540-610)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRIRDAINGGNPFGNPLQQGFNTGLF--LEP-NGFYQGNEADTRRSLATYADQIQIGLAGNLRDYVLISHTGEAKKGSEIHTFDGLPVGYTASPIETINYVSAHDNETLFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4034 for 282 contacts (-14.3/contact) +
2D Compatibility (PS) -5793 + (NN) 1850 + (LL) 14572
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: 2645.0 ( 9.38 by residue)
QMean score : 0.006
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