Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFKFILCLSLGIFAWAKEVIPTPSTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQIGFSTKEFDFSKNKAMKWSSYLGFFNKSPRVTRFGISLAQDMYTPSLANRKLVHLHDNHPYGGYLRVNLNVYNRHQTFMELFTISLGTTGQDSLAAQTQRLIHKWGHDPQFYGWNTQLKNEFIFELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNKVNTAFDGGMPYSDKFSIYFFAGAFGRFQPLNIFIQGNSPETR------------GIA-NLEYFVYASEIGAAMMWRSLRVAFTITDISKTFQSQPKHHQIGTLELNFAF
2Y4S Chain:A ((540-610))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRIRDAINGGNPFGNPLQQGFNTGLF--LEP-NGFYQGNEADTRRSLATYADQIQIGLAGNLRDYVLISHTGEAKKGSEIHTFDGLPVGYTASPIETINYVSAHDNETLFD


General information:
TITO was launched using:
RESULT:

Template: 2Y4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4034 for 282 contacts (-14.3/contact) +
2D Compatibility (PS) -5793 + (NN) 1850 + (LL) 14572
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: 2645.0 ( 9.38 by residue)
QMean score : 0.006

(partial model without unconserved sides chains):
PDB file : Tito_2Y4S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y4S-query.scw
PDB file : Tito_Scwrl_2Y4S.pdb: