Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEVVVVAAKRSAVGSFLGSLKNVGARQMGVSVLKDALNASSLKPSDVDSVILGNVLGAGLGQNIARQIQLDAGIPNDRNAFSVNMVCGSSMKAIQLAHDSIVLGCDEVVVCGGVENMSAAPYLSFDMREGKRMGNANMIDSMIHDGLWDAFNDYHMGITADNVAQAYHISREDQDAFALQSQLKARAAINAGKFQEEITPIEIANKKGVVVFKEDEYPRD-TTLESLAKLKPAFKKDGSVTAGNSSGINDGASIIILCSAKKAQKLGLKTMATIKGFGLGGCSPDIMGICPSIAIKNNLKNIKMNLNDINLFELNEAFAAQSIAVLKELELNPNIVNVNGGAIAIGHPIGASGARILVTLLHEMKRSGHGVGCASLCVGGGQGLSVVVEQK
2VU2 Chain:A ((5-390))---IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAH-LRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL


General information:
TITO was launched using:
RESULT:

Template: 2VU2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -244850 for 3806 contacts (-64.3/contact) +
2D Compatibility (PS) -41489 + (NN) -17551 + (LL) 156
1D Compatibility (HY) -27200 + (ID) 9300
Total energy: -340234.0 ( -89.39 by residue)
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_2VU2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VU2-query.scw
PDB file : Tito_Scwrl_2VU2.pdb: