Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRMKPIFLLIFLLLASLIAREKDASSNLFDLIDKGINREQELKEQEQKTRLKLAQSPLVALEIVPQETPYLE-WQGARESYYLKVSAVVESVVILKIDINQGRSCSLYPTPKSVSLVRNQ----SVAYEILCENQPLWIEVSTNLGKRTFQF
2WFP Chain:A ((31-104))
-----------------------------------------------------------------PQQQPMAELWMGAHPKSSSRIT-----TVSLRDAIEKNKTAMLG------EAVANRFGELPFLFKVLCAAQPLSIQVHPNKRNSEIGF
General information:
TITO was launched using:
RESULT:
Template:
2WFP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10891 for 290 contacts (-37.6/contact) +
2D Compatibility (PS) -6884 + (NN) -2124 + (LL) 6940
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: -16009.0 ( -55.20 by residue)
QMean score : -0.003
(partial model without unconserved sides chains):
PDB file :
Tito_2WFP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WFP-query.scw
PDB file :
Tito_Scwrl_2WFP.pdb
: