Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVSLYLENGLFLQAQSFGASGTQVGELVFNTSMSGYQEVISDPSYKGQFVVFSMPEIGVVGANPKDDESF-FSCAGVLARHYNEFFSNSRADSSLSTYLKKRGVLGISGVDTRSLIKTLR----HHGCLMMIASTIEHDRNKLEEVLKNAPKISHSPLVSSVSTPKIITHQRATFDFNT-LDYKPFDEKIPHKIIAVLDFGAKGNILNELQNVGLKALIYPHHTKANELIKAYEKKEISGIFLSNGPGDPLSLQQEIGEIKRLINAKIPMFGICLGHQLLSIAQGYPTYKLKFGHHGSNHPVKNLETNAVEITAQNHNYCVPEE-IEEIATITHRNLFDNTIEGVRYKNAPIISVQHHPESSPGPKESHYIFKEFVGLLEGF |
1C3O Chain:B ((7-377)) | ---LVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCI--IAGDNPDAALALEKA-RAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVA-YDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNP----DGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGISLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142173 for 3352 contacts (-42.4/contact) +
2D Compatibility (PS) -39675 + (NN) -21745 + (LL) 1592
1D Compatibility (HY) -29200 + (ID) 7550
Total energy: -238751.0 ( -71.23 by residue)
QMean score : 0.504
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