Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVLGISGASGIPLALRFLEKL-PKEIEIFVVASKNAHVVALEESNINLKNAMKDLRPSAT-----------FFNEQDIHASIASGSYGIHKMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPLLIAPREMPLSAIMLENLLKLAHSNAIIAPPMMTYYTQSKTLEAMQDFLVGKWFDSLGIENDLYPRWGMN
4ZAL Chain:A ((6-201))
-RITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMATQTDVALPAKPQAMQAFLTEYCGAAAGQIRVFGQNDWMAPPASGSSAPNAMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFYHQPQSVEDLVDFVVARILNTLGIPQDMLPRWGEQ
General information:
TITO was launched using:
RESULT:
Template:
4ZAL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149108 for 1484 contacts (-100.5/contact) +
2D Compatibility (PS) -19991 + (NN) -8996 + (LL) 208
1D Compatibility (HY) -14400 + (ID) 3500
Total energy: -195787.0 ( -131.93 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4ZAL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZAL-query.scw
PDB file :
Tito_Scwrl_4ZAL.pdb
: