Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFFLLKKFSEFLNTQTHFNLKRLNASSFLLETFSKEKHAFVVDLSAPY----IGLSKKPPESVLKNTLALDFCLNKFTKNAKILQANVIDNDRILEIKGAKDLAYKSETFILRLEMIPKKANLMILDQEKCVIEAFRFNDRVAKNDILGALPPNIYEHQEEDLDFKGLLDILEKDFLSYQHKELEHKKNQIIKRLNAQKERLKEKLEKLEDPKTLQLEAKELQTQASLLLTYQHLINRRENRVILKDFEDKECMIEIDKSMPLNAFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQINYVRDAAEESVLEMFMPVKNSKIKRPMNGYEVLYYKDFKIGLGKNQKENIKLLQDARANDLWMHVRDIPGSHLIVFCQKNTPKDEVIMELAKMLIKMQKDAFNGYEIDYTQRKFVKIIKGAHVIYSKYRTISLKDT |
4Q62 Chain:A ((161-221)) | ------------LKSLTHFNLRRNNITHQGVDSFAHLQSLTTIDLSQNTGIGDEGVSRLAPLKQLR-TLYLDNCGIGGEGIKAIAKMNLQTVDLSFNPGLKKEWGLDDIRPNHTIRTLLLTFCSLNDNHAKLIVSKFPAATDLNVANNNMTRAGVKTLLSNPIIENLDVSTQSLYAKQQEKEKAQDLLDTICNTITLKSINLEHTGITSRMLLSLIPDETDHKRYLKKINGVSCKELKPKLEQQIALRK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17717 for 347 contacts (-51.1/contact) +
2D Compatibility (PS) -5639 + (NN) -783 + (LL) 17404
1D Compatibility (HY) -1200 + (ID) 1050
Total energy: -8985.0 ( -25.89 by residue)
QMean score : 0.365
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