Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNKNIDPCFNPEQFLETQKYKGVVTALIFLLLFFIFLMVAFKKAFFAQANMPTLVMIKQDTATRGTIYSQDNYSLATSQTLFKLGFDTRFLNPNKEDFFIDFLSIYSNIPKESLKDALNTKGYTILAYNLTPNMAANIRDLNKKFLAFGVFQNFKDAHDKVWQKQGLNIEVSGVSRHYPYQNSLEPIIGYVQKQEEDKLTLTTGKKGVEKSQNNLLEAQQNGIRSGKRDVSFNFIQNHSYTEVERLDGYEVYLSVPLKLQREIETLLDKTKDKLRAKEILVGIINPKSGEILSLASSNRFDPNAIKTSDYENLNLSVAEKVFEPGSTIKPIVYSLLLDKNLINPKERIDLNHGYYQLGKYTIKDDFIPSKKAVVEDVLIQSSNVGMIKISKSLNPEDFYNGLLGYGFSQKTGIDLSLEATGKIPPLSAFKREVLKGSVSYGYGLNATFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGDIYIPSPKPTFQVISPKSARKMKETLIKV-VRYGTGKNAQFEGLYIGGKTGTA-RVAKNGSYSAESYNSSFFGFAEDERQVFTIGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPSIAIQNALEKNRLK |
| 4BJP Chain:A ((101-499)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYYPSGEVTAHLIGFTNVDSQ-------GIEGVEKSFDKWLT------------------------------AHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVV--RENSVLNTIPYRINGHEIK-DVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWS-DIERATFSFGYGLMVTPLQLARVYATIGSYG-IYRPLSITK---------VDPPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRY-INKYIAYTAGVAPASQPRFAL-VVVINDPQA-------VSAPVFGAIMGGVLRTMNIEPDA------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157087 for 3304 contacts (-47.5/contact) +
2D Compatibility (PS) -38360 + (NN) -22878 + (LL) 16208
1D Compatibility (HY) -19600 + (ID) 5100
Total energy: -226817.0 ( -68.65 by residue)
QMean score : 0.438
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