Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFNTISEKMDQYISPLANKLSQQRHLKATRDAFMSMLPITLFGSIPIILKAAPVTDDTKNGFLLAWANFAEKYDLILNWISGITLGAMSLYICVGITYYLCKHYHEDFLRPLMFSIAGFFMLVLNP-IKMG-W------DGKEVDISFLDGRGILLSIFVAIVTVEGYHWMRKKNVGRITMPDSVPASLSETFAALVPGIILMTFFSIIFIIFNL-LDTTAIQFLYEK-MAPSFKAADSLPFTILSIFLVHLFWFFGVHDAAL-AGILGPIRDGNLSINAAEKMAGQDLTNIFTTPFWTYFVIIGGSGSVLALAFLM-MRSKSKQLSTVGKVGFLPSIFGISEPLIFGTPLMLNPIFFFPFIFTSVFNGVITYLCMYFGIVGKTF--AVFSWQMPAPIGAFLSTM-DWRAIVLVFILIFLNGLMYYPFLKVYEKNLVALEKEAEEENIAAN |
| 3QNQ Chain:A ((3-434)) | -------RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPI-P-GYSEFMASLFG--KNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAYIMPGTKESILVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQK-KMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTTFGSIHNVVGKLLQEPLSILGASLWGAVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAGQDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAAV-TWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -359486 for 3486 contacts (-103.1/contact) +
2D Compatibility (PS) -42343 + (NN) -4720 + (LL) 1432
1D Compatibility (HY) -44800 + (ID) 6050
Total energy: -455967.0 ( -130.80 by residue)
QMean score : 0.328
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