Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKKLTVGGKFDWYIDTLEKSGMFILELSNEEIETFIFEDFIVGVTSFFSKNNLSELKANEIIDEDMEKNAYLLREKVLKIDNTDLWNINSVRQSSEWLDIFRRSDELKRQLKERWSDEEIEYLKTL |
3ZD6 Chain:A ((643-678)) | ----------DWGIHVKYKT----FEIPVIKIESFVVEDIATGVQTLYSK---------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4243 for 147 contacts (28.9/contact) +
2D Compatibility (PS) -3779 + (NN) 1231 + (LL) 7048
1D Compatibility (HY) -3200 + (ID) 700
Total energy: 4843.0 ( 32.95 by residue)
QMean score : -0.005
|
|
|