Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSRKQSIQKTQLSKTKKQTLNVTIDRPIGYTDKFGNVYPLNYGFVEGVIGGDGEEQDVYVLSRKISEPIDTFQGDLIAVITRNDDV-EDKWVVAAPNENF----------------TIEEIREKVHFIEQYFDSEIKLI
2BQX Chain:A ((50-144))
--------------------------------------YPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIK---HFFETYKDLE----
General information:
TITO was launched using:
RESULT:
Template:
2BQX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20974 for 452 contacts (-46.4/contact) +
2D Compatibility (PS) -8293 + (NN) -4179 + (LL) 3424
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -36622.0 ( -81.02 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_2BQX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BQX-query.scw
PDB file :
Tito_Scwrl_2BQX.pdb
: