Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKMGFIGNGKSTNRYHLPFILERDNIEVKTIYNRNPKTATWD--KIEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEIPESVHEFKFYDS-YLYGHGCHTIDQVLSYFGKPDNIHYDVRQLLGEGRMNDYFDLDLYYGVTKVSVKSSYFRIKARPSFVLYGKKGTFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTLTYVDDAGVWHEEKVISEVGDYGRVYDDLYEAIINGKPKQVTDEETLLQMEILEKGVEACK
3GDO Chain:A ((14-349))-IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVH---ELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLISEGSLEDINTYQVSYNRYRPEV----------ATGTLYDLGSHIIDQTLHLFGMPKAVTANVMAQRENAETVDYFHLTLDYGKLQAILYGGSIVPANGPRYQIHGKDSSFIKYGIDGQEDALRAGRKPEDDSWGADVPEFYGKLTTIRGSDK-KTETIPSVNGSYLTYYRKIAESIREGAALPVTAEEGINVIRIIEAAMESSK


General information:
TITO was launched using:
RESULT:

Template: 3GDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150639 for 2686 contacts (-56.1/contact) +
2D Compatibility (PS) -35424 + (NN) -16752 + (LL) 1256
1D Compatibility (HY) -15200 + (ID) 5150
Total energy: -221909.0 ( -82.62 by residue)
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_3GDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GDO-query.scw
PDB file : Tito_Scwrl_3GDO.pdb: