Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEAIERRDDDMTIVSFEVEISAPIQEVFALLTTNTGLAKWFNELEVGELGADGYLLF----VMTPE------EKITMPIRA------FEPNQKLAFEWD------QDEVAFELNEITANKTRLTFTEQLTTITEHSPR-DIS-GWHICLKKLQASAEGKIYDFNKTEFKTLFAKYQKELNIEK
2K5G Chain:A ((17-178))
----------DAQSIRFERLLPGPIERVWAWLADADKRARWLAGGELPRQPGQTFELHFNHAALTAETAPARYAQYDRPIVARHTLLRCEPPRVLALTWGGGAGEAPSEVLFELSE-AGEQVRLVLTH--TRLADRAAMLDVAGGWHAHLAVL----AGKLAGQAPPPFWTTLAQAEQD-----
General information:
TITO was launched using:
RESULT:
Template:
2K5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46600 for 899 contacts (-51.8/contact) +
2D Compatibility (PS) -14214 + (NN) 3233 + (LL) 2080
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -64451.0 ( -71.69 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_2K5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5G-query.scw
PDB file :
Tito_Scwrl_2K5G.pdb
: