Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTKM--LLDIHLATVNPDKFVDLYAAIKPAYMSFHLEASRDVNATINHIRELGIRPSIAISPDTEIEQIYPFLGKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVRLLEPIGADVYVVGTAALFNEKAGSYTEKLAPLREIIQER
3OVQ Chain:A ((7-204))
---IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD----IEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSE-------------------
General information:
TITO was launched using:
RESULT:
Template:
3OVQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172812 for 1646 contacts (-105.0/contact) +
2D Compatibility (PS) -20823 + (NN) -6424 + (LL) 2112
1D Compatibility (HY) -14800 + (ID) 3450
Total energy: -216197.0 ( -131.35 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_3OVQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OVQ-query.scw
PDB file :
Tito_Scwrl_3OVQ.pdb
: