Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LSYEPNTKETMQKIKELTSIPSPTG---NTGKIIEKLAKDLDASKIPYRLNNKGGLIVTLPGKDETKHRML-TAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIEGEYCTIETSAGDLYSGTILMHQTSVHVYKDAGTAERNDKNMEVRLDVKALDADKVRALGIEVGDFVSFDPRVQIINDEYIKSRHLDDKASVAILLQLINHIHENNLELPHTTHFLISNNEEIGYGG-----NSNIPAETVEYLAVDMGALGDGQTSDEYTVS---ICAKDGSGPYHLGLRKHLVELAKKNNIDYKVDIYPFYASDASAAINAGNDIIHGLIGPGIDASHAYERTHRDSLYHTEKLVYAYLFSNILK |
2CF4 Chain:A ((5-289)) | ----------IEKLKKFTQIPGISGYEERIREEIIREIKDF----ADYKVDAIGNLIVEL---GEGEERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKGIL-DGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPL-----DFAVFKKHFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHELE--GKVIFAFTVQEEVGLKGAKFLANHYYPQYA---FAIDSFACCSPLTGDVKLGKGPVIRAVDNSAIYSRDLARKVWSIAEKNGIEIQIGVTG-GGTDASA------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64162 for 2004 contacts (-32.0/contact) +
2D Compatibility (PS) -28817 + (NN) -6099 + (LL) 4008
1D Compatibility (HY) -16800 + (ID) 3900
Total energy: -115770.0 ( -57.77 by residue)
QMean score : 0.342
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