Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKMFVVLALVLSLSLVLMACGGSKDDANSGDSK---VLNVWAMGDEAKSL---KELAQKFTKDTGIEVKVQVIPWANAHDKLLTAVASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKKVGYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNE-QTTGFIFGRQNGSPLFDKDGT-----PVFNKKPFVDTVTYLDSFIKNGSAPDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESS--LGGANLSIFKYSDKKDDALKFMDYMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGADV----QTQMDTFNDQVETLLKK |
| 2ZYK Chain:A ((17-391)) | -----------------------------------KPDKLVVWENADDGVQLNNTKKWAGEFTKKTGIQVEVVPVALLKQQEKLTLDGPAGKGADLVTWPHDRLGEAVTKGLLQPIQVD-NSVKNQFDDV----AMKALTYGGKLYGLPKAIESVALIYNKKLMGQV-----PATYDELFQYAKANNKPDEQKYGVLFEANNFYYTYFLFAAKGAAVFKEQDGTLDPNEIGLNSPEAVQGMNEVQKWFTEARLPQS-LKADTVNGLFKSGKVAAVINGPWAIKDYQAAGINV----GVAPLPKIDGKDAQTFIGVKGWYLSAYSKYPKYATELMQFLTSKEALASRFKETGEIPPQKELLNDPMIKNNPVVNGFAKQASKGVPMPSIPEM-------GVVWEPINNAHTFVAQGKQTPEQALNDAVKIMKEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97968 for 3050 contacts (-32.1/contact) +
2D Compatibility (PS) -38068 + (NN) -18660 + (LL) 3496
1D Compatibility (HY) -17600 + (ID) 5100
Total energy: -173900.0 ( -57.02 by residue)
QMean score : 0.526
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