Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNLEKELKEYLGFDEFRPGQKEVIETALAKQNCFAMLPTGTGKTICYQLAGHLMDGLVLIVSPLLSLMQDQMERMRA--------HGEKRVA-ALNSFLKREEKGQILASIHSYKFIFLSPEMLNNE-----TVKNLLLKQKISLFVIDEAHCISQWGHDFRPDYLMLGRFIQEAKFPVT--MVLTATATKKVRADILTQLHLTDCAQIVYSVNRPNISLQVEKFSNQHVKKDRLYELVRKLQT--PGIIYFSSKKLAESTAHELSEIAELRVAYYHGDMDTEDRIIIQQQFVYGQLDVICATSAFGMGIDKADIRYVIHYHMPADLEAYLQEIGRAGRDGEDSVAILLYANGDEFIQMQLADQDIPDANLMNLTTEQRKTLPETEQRFIDYYQRSGLSTKELTDKMDYRKKWKRANLQQFIGYLHTTDCRRNYILRYFEEAPLEVTPENCCDLDGAEIINFEKRAKIKQKEIPTWEAYLAYLLQ |
| 4O3M Chain:A ((24-388)) | ----------FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPII------KLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAH---------RQDYKRMNMLRQ--KFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCL-EWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHD----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189339 for 2362 contacts (-80.2/contact) +
2D Compatibility (PS) -33518 + (NN) -14607 + (LL) 12564
1D Compatibility (HY) -23200 + (ID) 6250
Total energy: -254350.0 ( -107.68 by residue)
QMean score : 0.544
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