Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MERLQKVIANAGITSRRKAEKLIQEGKVTVNGKVVTELGVKVSGTERIEVEGIQLTKEEHRYFLFYKPRGTVSAVTDDKGRTTVADYFADIP-ERLYPVGRLDYDTSGLLLMTNDGDFANLLMHPKNEVSKTYIARIKGIPEREVIRQLERGVVIDGRKTAPAKVKVRSSD------------KTKDKAIVEITIHEGRNRQVRKMFEAVGFEVQKLSREEYSFLNLRGLNAGERRELSHHEVKQLKTEARFGKNKK |
2OML Chain:A ((9-188)) | ---------------------------------------------------------QPTRVILFNKPYDVLPQFTDEAGRKTLKEF---IPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRRKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVT------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61513 for 1222 contacts (-50.3/contact) +
2D Compatibility (PS) -17836 + (NN) -7143 + (LL) 6328
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -94714.0 ( -77.51 by residue)
QMean score : 0.576
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