Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLRKFQVKAFTVLESLIVLSVVAFMTLVFSTSFNNIFRQVEETIFFISFEHLYRDTQKLSAFGQKKQTLTISHNYLENTYERLYLPKTV-KVVKSDTLAFDANGGNSSLAKIQFECYRKTVTYQLYIGSGNYRKKEN
3HQT Chain:A ((88-147))
----------------------------------------------------------------EEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGAR
General information:
TITO was launched using:
RESULT:
Template:
3HQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4134 for 240 contacts (-17.2/contact) +
2D Compatibility (PS) -5657 + (NN) 2691 + (LL) 6840
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -5010.0 ( -20.88 by residue)
QMean score : 0.028
(partial model without unconserved sides chains):
PDB file :
Tito_3HQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HQT-query.scw
PDB file :
Tito_Scwrl_3HQT.pdb
: