Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVIRKFCTYQKLRVKAFTLLECLVALVTITGALLVYQGLTKLLAQQIVVMSSSSQSEWVLLTQQLNAEFEGAHLEYLRQNKLYLRKQDKIVTFGKSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET
4X6L Chain:A ((87-161))
----------------------------------LLYKHISERLKNTIEIEESKGISRYFDITT-------GTYIAYIRKSK-----SEKVIDFFKDNKRIERFSFIDNKVHMKETFNVDNKVCYQVFYDEKGYPYISRNINANNGAVGKTYV
General information:
TITO was launched using:
RESULT:
Template:
4X6L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3853 for 436 contacts (-8.8/contact) +
2D Compatibility (PS) -8116 + (NN) -3518 + (LL) 5364
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -15523.0 ( -35.60 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_4X6L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X6L-query.scw
PDB file :
Tito_Scwrl_4X6L.pdb
: