Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFTGGYASYLQEGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLKSNDNKASHKH |
4O9R Chain:A ((188-224)) | ----------------------------------------------------AILAVAQVDGDSVSGICFV--GYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHADLEDNWET |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56 for 199 contacts (-0.3/contact) +
2D Compatibility (PS) -3726 + (NN) 915 + (LL) 6316
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -1601.0 ( -8.05 by residue)
QMean score : -0.083
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