Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFIIRKGKILALLIAFLVINQLVPILAVWLLKNHYQTPFTSILLIGLELLIIALFLYYAKVKQIIRWKALLTRKALVTIFLGWLSLRVPQIIGYLIMTMQGVKDTANQTVIMELTKQLPLALMLIFTIIGAPIME---EIIF------RYIIPKELFAKHQKWGFVIGTLAFALIHSPSDIGSFIIYAGMGAILSFVYYKTEHLEYSIMVHFINNALAYSVLISTMMNN
4CHE Chain:A ((8-167))
HTMKIR------------------------------STKFSILNSDHPRIEVKKVFSLSPDVQVTIPYRRF-KGKAKVYFQND-------QIQGYFSCT-----DRQIDEIKISAPKNAPLLEPLLDICYYGSFIEPGFEQTFGFYPAGKREFVDSFFMHHSK-----------------DHKAFLIHMGLDKDLS--------LPLSPELNWKEPALSKVCRVTELDS-
General information:
TITO was launched using:
RESULT:
Template:
4CHE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151662 for 1064 contacts (-142.5/contact) +
2D Compatibility (PS) -15276 + (NN) 6586 + (LL) 6624
1D Compatibility (HY) -4000 + (ID) 1800
Total energy: -159528.0 ( -149.93 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_4CHE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CHE-query.scw
PDB file :
Tito_Scwrl_4CHE.pdb
: