Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFTYNREHVGDTLMVIVKDSQGAKLDVDRRGQVARVYLQDSKETVAWNIFEVSSLIVIEGAGQITLSDQDIKILNAELLKEGFEDSLVNNIEPTFVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLKTVAALPGAMMPNGSLIFPGKLRGEDSFGMLCSARELALPNAPQVRGIIELSDQVIVGESFDANKHWKN
2RHS Chain:B ((45-127))
-----------------------------------------------------------------------------------------------LVVGYIQSKEK-------NICQVDIGEEEPVQIVCGAPNVDAGQHVIVAKVGGRLPGGIKIKRAK---ERSEGMICSLQEIGISSNVVPKAYENGIFVFPTEVEPGTDALTAL
General information:
TITO was launched using:
RESULT:
Template:
2RHS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71659 for 494 contacts (-145.1/contact) +
2D Compatibility (PS) -8197 + (NN) -4234 + (LL) 7368
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -82672.0 ( -167.35 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_2RHS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RHS-query.scw
PDB file :
Tito_Scwrl_2RHS.pdb
: