Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILRRRTIVLWQLGIAISLILSILALNLYFHSTPLQTNAALRNLAPSLNHLFGTDGLGRDMF--VRTIKGLYFSLQVGLLGALMGVILATVFGVLAGLGNSIIDKIIAWLVDLFIGMPHLIFMILISFVVGK----------------GAQGVIIATAVTHWPSLARLIRNEVYHLKNKEFVQLSKSMGKTPYYIVRHHILPLIASQIFIGFILLFPHVILHEASMTFLGFGLSAEQPSVGIILSEAAKHISLGNWWLVIFPGLYLILVVNAFDTIGESLKKLFYPQTDHF
3D31 Chain:C ((67-283))
----------------------------------------------------DFSGL-VKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPLESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSV-DPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYY----PMVGPTLIYDRFISY--GLS-ASRPIAVLLILVTLSIFLVIR-------------
General information:
TITO was launched using:
RESULT:
Template:
3D31.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -203738 for 1557 contacts (-130.9/contact) +
2D Compatibility (PS) -20398 + (NN) -3606 + (LL) 6544
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -233448.0 ( -149.93 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_3D31.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D31-query.scw
PDB file :
Tito_Scwrl_3D31.pdb
: