Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRCSTKEMRLVYRDFLLQANQENKQITVLEADLSSSMSTNVLASEFGKRYINLGIMEAEMVGLAAGLAIKGYK-PYLHTFGPFASRRVFDQVFLSLGYSQLSATIIGSDAGVSAEMNGGTHMPFEELGLLRLIPKATIFEVSDDIQFEAILKQTLSIDGLKYIRTIRKAPTAVYEGCEDFSKGFIQ-LRQGKD--IALVASGIMVSRAIEAADYLKELGIEASVIDLFKIKPLPEELKPLLIDQS------IVTIENHNRIGGIGSALCEWLSMEKDTTVSRMGIDERFGQVGQMKYLLEEYGLAVKDIVEHCKSIYKS |
3OOY Chain:A ((314-603)) | --------RKAYGQALAKLGHASDRIIALDGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTR-AFDQIRMA-AISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAELLKKEKINIRVLDPFTIKPLDRK---LILDSARATKGRILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVN-RVPRSGKPAELLKMFGIDRDAIAQAVRGLI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169026 for 2533 contacts (-66.7/contact) +
2D Compatibility (PS) -30573 + (NN) -12479 + (LL) 1580
1D Compatibility (HY) -15200 + (ID) 4350
Total energy: -230048.0 ( -90.82 by residue)
QMean score : 0.462
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