Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNLDILYCKLAMCTTLLTERLRLQPVDLSNINDFLEFSSDSETVFYMQRYKANTTEEA-QMVLANVCMKSPLGIYAMIETESNKMIGIIELEIRDEFS-AEFGYILNKNYSGKGYMTEACSKLMSVGFEYLDLERIYARFDINNKKSGNVMERLGMKKEGELRHLAKNPKGEWKTRAYYSILKEEYFNKVNTK
2FSR Chain:A ((28-168))
--------------PTLRTERLTLRPLAMADFPAYRDFMASPRSTGVGGPYDLPSTWGVFCHDLANWHFFG-HGALMIDLGETGECIGQIGINHGPLFPEKELGWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPLAPRSDPEDLVYRYHQ-----------------
General information:
TITO was launched using:
RESULT:
Template:
2FSR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72195 for 1017 contacts (-71.0/contact) +
2D Compatibility (PS) -14566 + (NN) 1033 + (LL) 2088
1D Compatibility (HY) -6000 + (ID) 2000
Total energy: -91640.0 ( -90.11 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2FSR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FSR-query.scw
PDB file :
Tito_Scwrl_2FSR.pdb
: