Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLEIAKVYLQGLGLASITVILVGIIWVFWRAKKNIDKTARERQSVLYDVLLIALMTAPILAFAFVAIILMIKA
2KLU Chain:A ((391-401))
-------------------------IFFSVRSRHRR--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KLU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -751 for 32 contacts (-23.5/contact) +
2D Compatibility (PS) -931 + (NN) 1514 + (LL) 7556
1D Compatibility (HY) -800 + (ID) 100
Total energy: 6488.0 ( 202.75 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2KLU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KLU-query.scw
PDB file :
Tito_Scwrl_2KLU.pdb
: