Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSKATFHIGTIIKTHYLFNFFRKQGI----VAMTQEEIDQMIEDWI-SNGFPDELKRLIPDEE
1QZM Chain:A ((503-548))
-------------KRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVR-GLEREI----
General information:
TITO was launched using:
RESULT:
Template:
1QZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28906 for 215 contacts (-134.4/contact) +
2D Compatibility (PS) -4419 + (NN) -1695 + (LL) 852
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -38218.0 ( -177.76 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_1QZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QZM-query.scw
PDB file :
Tito_Scwrl_1QZM.pdb
: