Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNKKLLITGKILLAILYIIVLFAVCVLAAMAFLSLFGSKLLDVDFFTLFLSDGIFKGGLMLGIVFFLVVLDASI
1OOE Chain:A ((2-10))
-SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG
General information:
TITO was launched using:
RESULT:
Template:
1OOE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 0 for 16 contacts (0.0/contact) +
2D Compatibility (PS) -1071 + (NN) -15 + (LL) 208
1D Compatibility (HY) -1200 + (ID) 100
Total energy: -2178.0 ( -136.12 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_1OOE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OOE-query.scw
PDB file :
Tito_Scwrl_1OOE.pdb
: