Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVLGKLPDGIFTLLRFNDEGGQLTHISESEALWLTLELAPEKMDCI
2ZYZ Chain:B ((45-59))
---------------------NAPLILGLYEALYLAEKGRLKVMGED
General information:
TITO was launched using:
RESULT:
Template:
2ZYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1911 for 51 contacts (-37.5/contact) +
2D Compatibility (PS) -1717 + (NN) -492 + (LL) 1196
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -4324.0 ( -84.78 by residue)
QMean score : 0.123
(partial model without unconserved sides chains):
PDB file :
Tito_2ZYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZYZ-query.scw
PDB file :
Tito_Scwrl_2ZYZ.pdb
: