Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEFIANGRVASIPDDAVGRTANGHVSFKFEFVCDSSQQDQEGKGL---PAFFHVQVYGKQAEIMAQSLSKGLPILIKGEIIQRPYTNQQG-QRRTFQYISPSQHDGITFLESKEATKKRKQGRFTSQAVTSPTLAYSEPVDADEPF
3TQY Chain:A ((20-110))
--------------DPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTEWHRIAFFNRLAEIVGEYLRKGSKIYIEGSLRTRKWQDKNGVDRYTTEIIANEMHMLD---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23907 for 453 contacts (-52.8/contact) +
2D Compatibility (PS) -9690 + (NN) -3208 + (LL) 3428
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -38427.0 ( -84.83 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_3TQY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQY-query.scw
PDB file :
Tito_Scwrl_3TQY.pdb
: