Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKSQTDYFSDDLMADALQAENYLRQSYTCPLQTIQR-GIEQGLQSYLERYRLASPQLKFQIFLFSNFYGEKMKYLLEEGEGEFHV
4TOF Chain:A ((113-154))
------DYVSRDLLKDILESEEEHIDYLETQLGLIQKVGLENYLQSHMHED-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4TOF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2697 for 167 contacts (-16.1/contact) +
2D Compatibility (PS) -4488 + (NN) -473 + (LL) 3092
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -8166.0 ( -48.90 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_4TOF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TOF-query.scw
PDB file :
Tito_Scwrl_4TOF.pdb
: