Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIFDERELKERFTHENRVSFYEFVAKYDAQMVPVMKAKGYRCIHSMERTVVFTFGEFTIRRRRWQKGEHWVVPVDEKLGLKKNVRYSLEFMYQIASLAT---MMPYEKVIKVVQMMYCIVITKPTVVKAVKISRELLKEKEAYRFFDEDIPVDKEPVDMIYLEGDGVMVKAREEGLDNRNVDLSHFVVHTGSQKVGSNRFVLQNKKEFVSLDNRQTRQKILDYLYNHFYIAPNTLLITNSDGGHGYTPYVFKEIAKALKVKQHEHFWDRYHVNEKIKSFFKLYPVELMTGAFQSIKQHDKEKLRTVLDTTEALILMEEEMEGFNQFKRKLLNNFQYTKSAELRGFSRAGIGVMESQHRKITYRMKKRGMYWTIQGAETMSQLIVLSYEGQLRDLFFGSWREDYQKYQELENLSAGKIKHEQNKINKRYDLQTLGRLRYGRHRNL |
| 2JN6 Chain:A ((5-50)) | -------------------------------------------------------------------------------------TYSEEFKRDAVALYENSDGASLQQIANDL------GINRVTLKNWIIKYGSNHNVQGTTPSAAVSEAEQIRQLKKENALQRARTRHPAESCLEHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -31927 for 237 contacts (-134.7/contact) +
2D Compatibility (PS) -4303 + (NN) 1161 + (LL) 27524
1D Compatibility (HY) 1200 + (ID) 350
Total energy: -6695.0 ( -28.25 by residue)
QMean score : 0.450
|
|
|