Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANHRIDRVGMEIKREVNEILRLRVNDPRVQDVTITDVQMLGDLSMAKVFYTIHSTLASDNQKAQIGLEKATG-----TIKRELGKNLTMYKIPDLQFVKDESIEYGNKIDEMLRNLDKKD
2LIU Chain:A ((1947-2014))
---------------------------PQVNQVNLSEIKQVLKQQLAEALYTEESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYD--------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10851 for 324 contacts (-33.5/contact) +
2D Compatibility (PS) -6347 + (NN) -1008 + (LL) 4140
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -18566.0 ( -57.30 by residue)
QMean score : 0.313
(partial model without unconserved sides chains):
PDB file :
Tito_2LIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LIU-query.scw
PDB file :
Tito_Scwrl_2LIU.pdb
: