Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKKLLRKEVLITLKSQPQAYKSEVDCKLLEAFIKTKAYQNSCVIATYLSFDYEYNTQLLIKQALCDGKRVLVPK-TYPKGKMIFVDYQKDN----LRATPFGLLEP----VNDRAVEKASIDLIHVPGLIFNNKGFRIGYGAGYFDRYLSDFEGDTISTIYRC-QRQDFVEEKHDVAVKEVLCL
3HY6 Chain:A ((10-181))
--KRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQDEIETEEIIKDIFQRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVREEALSTGGLDLIFMPGLGFDKHGNRLGRGKGYYDAYLK-----------RCLQHQEVKPYTLALAFKEQICL
General information:
TITO was launched using:
RESULT:
Template:
3HY6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70220 for 1158 contacts (-60.6/contact) +
2D Compatibility (PS) -17590 + (NN) -4485 + (LL) 800
1D Compatibility (HY) -10800 + (ID) 2600
Total energy: -104895.0 ( -90.58 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_3HY6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HY6-query.scw
PDB file :
Tito_Scwrl_3HY6.pdb
: