Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTKDGKLEVLPSTGETKTILAILGGLAILGAIWVGWKENIKKYLTFLKKKSKK |
| 2KNC Chain:B ((718-734)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITIHDRKEFAKFEEER-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KNC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 459 for 61 contacts (7.5/contact) +
2D Compatibility (PS) -1810 + (NN) -1489 + (LL) 12360
1D Compatibility (HY) 0 + (ID) 50
Total energy: 9470.0 ( 155.25 by residue)
QMean score : 0.544
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