Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLRTDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERKELEERAMDSNDIEKERGITILAKNTAVAYN-----DVRINIMDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQNLIPIVVVNKIDKPSARPSEVVDEVLELFIELGADDDQLDFPVVYASAINGTSSMSDDPLDQEKTMAPIFDTIIDHIPAPVDNSEEPLQFQVSLLDYNDFVGRIGIGRVFRGTVKVGDQVTLSKLDGTTKNFRVTKLFGFFGLERKEIQEAKAGDLI-AVSGMEDIFVGETVT----PTDDIEPLPVLRIDEPTLQM-TFLVNNSPF-AGREGKWITSRKVEERLLAELQ-TDVSLRVDPTDSPD---KWTVSGRGELHLSILIETMRREG------------YELQVSRPEVI----------IKEIDGVQCEPFERVQIDTPEEYQGAIIQSLSERKGDMLDMQMVGNGQTRLIFLIP-ARGLIGYSTEFLSMTRGYGIMNHTFDQYLPVVQGEIGGRHRGVLVSIENGKATTYSIMRIEERGTIFVNPGTEVYEGMIVGENSRDNDLGVNITTAKQMTNVRSATKDQTAVIKTPRILTLEESLEFLADDEYMEVTPESIRLRKQILNKAARDKANKKKKSAE |
| 3CB4 Chain:D ((3-475)) | ------NIRNFSIIAHI----STLSDRIIQICGG---------------------------QSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEI-EDIVGIDATD------AVRCSAKTGVG------------VQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDKVKVMS-TGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTLARNPAE--KALPGFKKVKPQVYAGLFPVSSDDYEAFRDA------------LGKLSLNDASLFYEPESSSALGFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPAVNNIYELR-EPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGN-QVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRGRELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYG-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165922 for 3199 contacts (-51.9/contact) +
2D Compatibility (PS) -43345 + (NN) -10238 + (LL) 7896
1D Compatibility (HY) -25600 + (ID) 6350
Total energy: -243559.0 ( -76.14 by residue)
QMean score : 0.422
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