Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKAILLIILIAFVIIAIIKIALLKLYMNTIKPKVDNEGNIITKPVKDDLTPEEREEREFDKDW
3SOK Chain:A ((2-31))
-----TLIELMIVVAIIGILAAFAIPAYNDYIARSQAAEGLTLADGLKVRISDHLESGECKGDAN
General information:
TITO was launched using:
RESULT:
Template:
3SOK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12380 for 115 contacts (-107.7/contact) +
2D Compatibility (PS) -3392 + (NN) -4992 + (LL) 492
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -23022.0 ( -200.19 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_3SOK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SOK-query.scw
PDB file :
Tito_Scwrl_3SOK.pdb
: