Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYREITAVE-HDRFVSESNQTNLLQSSNWPKVKDNWGSQLLGFFDGETQI-ASASILIKSLPLGFSMLYIPRGPIMDYSNLDIVTKVLKD-LKAFGKKQRALFIKCDPLIYLKMVNAKDFENSPDEKEGLIAIDHLQRAGADWTGRTTDLAHTIQPRFQANLYANQF-----GLDKMSKKTRQAIRTSKNKGVDIQFG-SHELLEDFAELMKKTEDRKGINLRGIDYYQKLLDTYPNNSYITMASLDVAKRLEKIEKECQIAQSERIKSLELNREKKVKQHQGTIDRLNKEIDFLKEAQKAYDRDIIPLAATLTLEFGNTSENIYAGMDDYFKSYSAPIYTWFETAQRAFERGNIWQNMGGIENDLS-GGLYHFKSKF-EPIIEEFIGEFNIPVNRLLYKASNYVYALRKKRNS |
| 1XE4 Chain:A ((10-321)) | ------AVERYEEFMRQSPYGQVTQDLGWAKVMNNWEPVDVYLEDDQGAIIAAMSMLLGDTPTDKKFAYASKGPVMDVTDVDLLDRLVDEAVKAL--DGRAYVLRFDP-----EVAYSDEFNTTLQDHGYVT---RNRNVAD-----AGMHATIQPRLNMVLDLTKFPDAKTTLDLYPSKTKSKIKRPFRDGVEVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRM-----------QAAFD--------------ADTMRIFVAE--REGKL------------------------------LSTGIALKYGRKIWYMYAGSMD-GNTYYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHVFVKDAPREYIGEIDKVLDPEVYAELVKD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XE4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44652 for 2371 contacts (-18.8/contact) +
2D Compatibility (PS) -31836 + (NN) -4564 + (LL) 6764
1D Compatibility (HY) -18000 + (ID) 4800
Total energy: -97088.0 ( -40.95 by residue)
QMean score : 0.365
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