Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRKQFIKLGIATLLTVISLYTPINLATNHTTENIVTAQEYKTKENGTLPFKHKRQLVLGELDDKGRATFAHIQLKVKDEPKKKRVKRLKTTPVGWHNFKFYYNDGTQKAWLMSRGRLICHQFSGLNNERKNLVPMTNWLNTGNYNSTNSSNPESMLFYEKQLKTWLSTHKNYYLDYKVTPIYQNNELIPRKIELKYVGIDKTGKLLPIFIGNKSTQDQFGISTV----TLENTSPNATIDYLSGKAQNT-VLSAKEQRKLIAKHEEEKRLAEKKVEEEKAAAETQKKLEEEQARLAAEAQRKQKEEQARLAAETQKKQETLVQEQTSQGYKRD----YRGRWHRPNGQYASKAEIAAAGLQW |
| 4NA1 Chain:A ((411-564)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPYLQLTDSPFY----IVQEKQEWKSV-TDRDGNELPRRAGISS----FGIGGVNAHIVIEEYMP---------EQPNVIVLSAKNKSRLIDRASQLLEVIRNK-----------KYTDQDLHRIAYTLQVGREEMDERLACVAGTMQELEEKLQAFVDGKEETDEFFRGQSHRNKETQTIFTADEDMALAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 41286 for 695 contacts (59.4/contact) +
2D Compatibility (PS) -14539 + (NN) -6781 + (LL) 12564
1D Compatibility (HY) -3200 + (ID) 2300
Total energy: 27030.0 ( 38.89 by residue)
QMean score : 0.219
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