Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKLVATDMDGTFLDENGTYDKKRLANVLKKFKEQGIVFTAASGRSLLSLEQLFADFRDQM---AFIAENGSAAVLFNRLAYEQHLSREQYLDIID--HLSKSP--YMENNEYVLSGKDGAYI------LSDANPDYIEFITHYYDNLQKVSHFEDVDDIIFKVTANFTEETVRQAEEWVNQAIPYTTAVTTGFKSIDIILSSVNKRNGLEHLCEQYGIRAEEVLSFGDNINDLEMLEWSGKAIATENARPEVKEIADCIIGHHNNQAVMAYLESMVD |
2QYH Chain:A ((4-254)) | --KIVFFDIDGTLLDEQKQLPLSTIEAV-RRLKQSGVYVAIATGRAPFMFEHV----RKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPL---YYEN-------KDIYQALLFCRAEEEEPYVRNYPEF--------RFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQLQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67555 for 1961 contacts (-34.4/contact) +
2D Compatibility (PS) -26436 + (NN) -12657 + (LL) 2504
1D Compatibility (HY) -19200 + (ID) 3600
Total energy: -126944.0 ( -64.73 by residue)
QMean score : 0.483
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